Maize gene database

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August undefined, 2024

WebDec 6, 2024 · This resource of gene-indexed mutations helps to address the need for the functional analysis of genes of interests via the reverse genetic approach. Moreover, a rapid and low-cost pipeline for gene mapping was constructed in maize from a revision of the previously described MutMap in rice (. Abe et al., 2012. ). WebMaize was domesticated from wild teosinte in Central America and its cultivation spread throughout the Americas by Pre-Columbian civilisations. In addition to its economic …

Maize Gene Atlas Developed by RNA Sequencing and …

WebFeb 20, 2016 · Maize (Zea mays) is one of the most important cereal crops in the world due its importance to human nutrition and health. Thus, identifying and annotating all the … WebMaize has long been a model organism for the study of quantitative genetics and phenotypic variation. The overall goal of this project is to use functional genomics approaches to … scratch long

Development of maize gene expression database to augment …

WebOct 22, 2024 · MaizeMine also provides database cross references between genes of alternative gene sets from Gramene and NCBI RefSeq. MaizeMine includes several search tools, including a keyword search, built-in template queries with intuitive search menus, and a QueryBuilder tool for creating custom queries. WebGene sets include genes from MaizeGDB for all the lines, and NCBI RefSeq for B73. The gene sources for the MaizeGDB gene sets include both the name of the maize line and … WebNational Center for Biotechnology Information scratch lonely

MGFD - Database Commons

WebThe main objectives of this project are to (1) develop added functionality to a maize coexpression database (COB:http://csbio.cs.umn.edu/cob/); (2) to develop approaches to integrate RNAseq and microarray data into co-expression networks and (3) to apply tools from the COB database to discover potential candidate genes that incluence natural … WebJun 16, 2024 · MaizeCUBIC is a free database that describes genomic variations, gene expression, phenotypes and quantitative trait locus (QTLs) for a maize CUBIC population (24 founders and 1404 inbred offspring). scratch loopsWebGenetics Collection of maize phenotypes and related genetic locus, including GWAS, eQTL and QTL signals. Populations Collection of maize populations and and provides necessary information to understand the population structures. Epigenetics scratch looking rash

"WebThe gene sources for the MaizeGDB gene sets include both the name of the maize line and the MaizeGDB gene set name, e.g. "B73 Zm00001eb.1", to make it easy to select a maize line of interest. Query for genes: ... The query templates in this category allow you to retrieve gene database crossreference ids for B73 (Zm00001eb.1 <=> RefSeq) and … " - Maize gene database

Maize gene database

RGPDB: database of root-associated genes and promoters in maize ...

WebFeb 20, 2016 · Compared to the ProFITS database, the MGFD database has more powerful data and function. At first, the MGFD contains 96 maize gene families, while the ProFITS … WebMaize (Zea mays) was McClintock’s plant model of choice, and has served as a model organism for over a hundred years. Maize is also of substantial economic significance in the United States. ... Database can be queried by AGPv2/v3 gene IDs. The new AGPv4 IDs should be converted to AGPv3 using “ID convert”. Original data and source code ...

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WebApr 23, 2013 · Transcriptome analysis is a valuable tool for identification and characterization of genes and pathways underlying plant growth and development. We … WebSep 4, 2024 · The Maize Genomics Resource contains a set of search and query tools including a BLAST server, genome browsers for AGPv4, ... Hoopes et al. (2024) An …

http://maize.uga.edu/index.shtml WebMaizeGDB is a community-oriented, long-term, federally funded informatics service to researchers focused on the crop plant and model organism Zea mays. Genomic, genetic, …

WebApr 12, 2024 · Oil is one of the main components in maize kernels. Increasing the total oil content (TOC) is favorable to optimize feeding requirement by improving maize quality. To better understand the genetic basis of TOC, quantitative trait loci (QTL) in four double haploid (DH) populations were explored. TOC exhibited continuously and approximately … WebAug 28, 2024 · MaizeDIG is a genotype-phenotype linking database based on BioDIG that has been enhanced to show phenotype images on a genome browser and handle …

WebOct 22, 2024 · MaizeMine is the data mining resource of the Maize Genetics and Genome Database (MaizeGDB; http://maizemine.maizegdb.org). It enables researchers to create …

WebNational Center for Biotechnology Information scratch lordsWebZea mays (maize) is the most widely produced crop in United States, and U.S. agriculture accounted for 36% of world maize production in 2015. Maize has also been in the center … scratch loreWebA co-expression network database for maize. Zea mays (maize) is the most widely produced crop in United States, and U.S. agriculture accounted for 36% of world maize production in 2015. Maize has also been in the center of the genetics research for over 100 years, including McClintock's pioneering work with transposable elements. scratch loop blocksWebApr 7, 2024 · The structure of the maize kernels plays a critical role in determining maize yield and quality, and high-throughput, non-destructive microscope phenotypic characteristics acquisition and analysis are of great importance. In this study, Micro-CT technology was used to obtain images of maize kernels. An automatic CT image … scratch looks blockshttp://www.zeamap.com/ scratch looking fontWebApr 13, 2024 · The first SUS gene ZmSH1 was cloned from maize (Chourey and Nelson 1976), a large number of SUS gene family members have been identified through NCBI database alignments. There are five SUS gene family members in the maize genome, among which ZmSH1, ZmSUS1, and ZmSUS3 have been successfully cloned, their … scratch losangeWebFunding Source. Objective 1: Integrate new maize genetic and genomic data into the database. Objective 2: Provide community support services, such as lending help to the community of maize researchers with respect to developing and publicizing a set of guidelines for researchers to follow to ensure that their data can be made available … scratch lost in space animation